Publications
The lab’s publications span disease heterogeneity, statistical genetics, computational genomics, and translational discovery. This page collects peer-reviewed papers and preprints, with keyword links to help you browse by topic.
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List of publications and preprints
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L Hou, Y Li, X Xiong, Y Tanigawa, Y Park, SW Lenz, A Grayson, JH Lee, E Ryu, JE Olson, JM Biernacka, MA Frye, T Ordog, M Kellis.
Nature Communications.
2026
I Rao, M Kellis, Y Tanigawa.
bioRxiv.
2025
Z Liu, S Zhang, BT James, K Galani, RJ Mangan, SB Fass, C Liang, MM Wagle, CA Boix, Y Tanigawa, S Yun, Y Sung, X Xiong, N Sun, L Hou, M Wohlwend, M Qiu, X Han, L Xiong, E Preka, L Huang, WF Li, LL Ho, A Grayson, J Mantero, A Kozlenkov, H Mathys, T Chen, S Dracheva, DA Bennett, LH Tsai.
Cell.
2025
Y Tanigawa, M Kellis.
The American Journal of Human Genetics.
2024
R Ohta, Y Tanigawa, Y Suzuki, M Kellis, S Morishita.
Nature Communications.
2024
Y Tanigawa, M Kellis.
The American Journal of Human Genetics.
2023
N Sun, MB Victor, YP Park, X Xiong, AN Scannail, N Leary, S Prosper, S Viswanathan, X Luna, CA Boix, BT James, Y Tanigawa, K Galani, H Mathys, X Jiang, AP Ng, DA Bennett, LH Tsai.
Cell.
2023
The COVID-19 Host Genetics Initiative.
Nature.
2023
J Yang, M Vamvini, P Nigro, LL Ho, K Galani, M Alvarez, Y Tanigawa, A Renfro, NP Carbone, M Laakso, LZ Agudelo, P Pajukanta, MF Hirshman, RJW Middelbeek, K Grove, L Goodyear, M Kellis.
Cell Metab.
2022
Y Tanigawa, ES Dyer, G Bejerano.
PLOS Comput Biol.
2022
VN Parikh, AG Ioannidis, D Jimenez-Morales, JE Gorzynski, HND Jong, X Liu, J Roque, VP Cepeda-Espinoza, K Osoegawa, C Hughes, SC Sutton, N Youlton, R Joshi, D Amar, Y Tanigawa, D Russo, J Wong, JT Lauzon, J Edelson, DM Montserrat, Y Kwon, S Rubinacci, O Delaneau, L Cappello, J Kim, MJ Shoura, AN Raja, N Watson, N Hammond, E Spiteri, KC Mallempati, G Montero-Martin, J Christle, J Kim, A Kirillova, K Seo, Y Huang, C Zhao, S Moreno-Grau, S Hershman, KP Dalton, J Zhen, J Kamm, K Bhatt, A Isakova, M Morri, T Ranganath, CA Blish, AJ Rogers, K Nadeau, S Yang, A Blomkalns, R O’Hara, NF Neff, C DeBoever, S Szalma, MT Wheeler, C Gates, K Farh, GP Schroth, P Febbo, F deSouza, O Cornejo, M Fernandez-Vina, A Kistler, J Palacios, BA Pinsky, CD Bustamante, MA Rivas, EA Ashley.
Nat Commun.
2022
J Qian, Y Tanigawa, R Li, R Tibshirani, MA Rivas, T Hastie.
Ann. Appl. Stat.
2022
C Smail, NM Ferraro, Q Hui, MG Durrant, M Aguirre, Y Tanigawa, MR Keever-Keigher, AS Rao, JM Justesen, X Li, MJ Gloudemans, TL Assimes, C Kooperberg, AP Reiner, J Huang, CJ O'Donnell, YV Sun, Million Veteran Program, MA Rivas, SB Montgomery.
The American Journal of Human Genetics.
2022
Y Tanigawa, J Qian, GR Venkataraman, JM Justesen, R Li, R Tibshirani, T Hastie, MA Rivas.
PLOS Genetics.
2022
GR Venkataraman, C DeBoever, Y Tanigawa, M Aguirre, AG Ioannidis, H Mostafavi, CCA Spencer, T Poterba, CD Bustamante, MJ Daly, M Pirinen, MA Rivas.
Am J Hum Genet.
2021
S Sakaue, M Kanai, Y Tanigawa, J Karjalainen, M Kurki, S Koshiba, A Narita, T Konuma, K Yamamoto, M Akiyama, K Ishigaki, A Suzuki, K Suzuki, W Obara, K Yamaji, K Takahashi, S Asai, Y Takahashi, T Suzuki, N Shinozaki, H Yamaguchi, S Minami, S Murayama, K Yoshimori, S Nagayama, D Obata, M Higashiyama, A Masumoto, Y Koretsune, FinnGen, K Ito, C Terao, T Yamauchi, I Komuro, T Kadowaki, G Tamiya, M Yamamoto, Y Nakamura, M Kubo, Y Murakami, K Yamamoto, Y Kamatani, A Palotie, MA Rivas, MJ Daly, K Matsuda, Y Okada.
Nature Genetics.
2021
S Goyal, Y Tanigawa, W Zhang, J Chai, M Almeida, X Sim, M Lerner, J Chainakul, JG Ramiu, C Seraphin, B Apple, A Vaughan, J Muniu, J Peralta, DM Lehman, S Ralhan, GS Wander, JR Singh, NK Mehra, E Sidorov, MD Peyton, PR Blackett, JE Curran, ES Tai, Rv Dam, C Cheng, R Duggirala, J Blangero, JC Chambers, C Sabanayagam, JS Kooner, MA Rivas, CE Aston, D Sanghera, APOC3 genetic variation, s triglycerides.
Lipids in Health and Disease.
2021
IV van Blokland, P Lanting, APS Ori, JM Vonk, RCA Warmerdam, JC Herkert, F Boulogne, A Claringbould, EA Lopera-Maya, M Bartels, JJ Hottenga, A Ganna, J Karjalainen, Lifelines COVID-19 cohort study, COVID-19 Host Genetics Initiative, C Hayward, C Fawns-Ritchie, A Campbell, D Porteous, ET Cirulli, KM Schiabor Barrett, S Riffle, A Bolze, S White, F Tanudjaja, X Wang, JMI Ramirez, YW Lim, JT Lu, NL Washington, EJC de Geus, P Deelen, HM Boezen, LH Franke.
PLOS ONE.
2021
COVID-19 Host Genetics Initiative.
Nature.
2021
R Li, C Chang, Y Tanigawa, B Narasimhan, T Hastie, R Tibshirani, MA Rivas.
Bioinformatics.
2021
Y Tanigawa.
JSBi Bioinformatics Review.
2021
N Sinnott-Armstrong, Y Tanigawa, D Amar, N Mars, C Benner, M Aguirre, GR Venkataraman, M Wainberg, HM Ollila, T Kiiskinen, AS Havulinna, JP Pirruccello, J Qian, A Shcherbina, FinnGen, F Rodriguez, TL Assimes, V Agarwala, R Tibshirani, T Hastie, S Ripatti, JK Pritchard, MJ Daly, MA Rivas.
Nature Genetics.
2021
R Li, Y Tanigawa, JM Justesen, J Taylor, T Hastie, R Tibshirani, MA Rivas.
Bioinformatics.
2021
M Aguirre, Y Tanigawa, GR Venkataraman, R Tibshirani, T Hastie, MA Rivas.
European Journal of Human Genetics.
2021
A Cordova-Palomera, C Tcheandjieu, J Fries, P Varma, V Chen, M Fiterau, K Xiao, H Tejeda, B Keavney, H Cordell, Y Tanigawa, G Venkataraman, M Rivas, C Re, E Ashley, JR Priest.
Circ Genom Precis Med.
2020
J Qian, Y Tanigawa, W Du, M Aguirre, C Chang, R Tibshirani, MA Rivas, T Hastie.
PLOS Genetics.
2020
R Li, C Chang, JM Justesen, Y Tanigawa, J Qiang, T Hastie, MA Rivas, R Tibshirani.
Biostatistics.
2020
E Flynn, Y Tanigawa, F Rodriguez, RB Altman, N Sinnott-Armstrong, MA Rivas.
European Journal of Human Genetics.
2021
Y Tanigawa, M Wainberg, J Karjalainen, T Kiiskinen, G Venkataraman, S Lemmel\"a, JA Turunen, RR Graham, AS Havulinna, M Perola, A Palotie, FinnGen, MJ Daly, MA Rivas.
PLOS Genetics.
2020
C DeBoever, Y Tanigawa, M Aguirre, G McInnes, A Lavertu, MA Rivas.
The American Journal of Human Genetics.
2020
Y Tanigawa, J Li, JM Justesen, H Horn, M Aguirre, C DeBoever, C Chang, B Narasimhan, K Lage, T Hastie, CY Park, G Bejerano, E Ingelsson, MA Rivas.
Nature Communications.
2019
DM Ruderfer, CG Walsh, MW Aguirre, Y Tanigawa, JD Ribeiro, JC Franklin, MA Rivas.
Molecular Psychiatry.
2020
G McInnes, Y Tanigawa, C DeBoever, A Lavertu, JE Olivieri, M Aguirre, MA Rivas.
Bioinformatics.
2019
S Anand, L Kalesinskas, C Smail, Y Tanigawa.
Pacific Symposium on Biocomputing.
2018
C DeBoever, Y Tanigawa, ME Lindholm, G McInnes, A Lavertu, E Ingelsson, C Chang, EA Ashley, CD Bustamante, MJ Daly, MA Rivas.
Nature Communications.
2018
T Ohta, T Kawashima, NO Shinozaki, A Dobashi, S Hiraoka, T Hoshino, K Kanno, T Kataoka, S Kawashima, M Matsui, W Nemoto, S Nishijima, N Suganuma, H Suzuki, YH Taguchi, Y Takenaka, Y Tanigawa, M Tsuneyoshi, K Yoshitake, Y Sato, R Yamashita, K Arakawa, W Iwasaki.
Journal of Plant Research.
2018